STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE87566.1Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (364 aa)    
Predicted Functional Partners:
SFE87489.1
TRAP transporter, DctM subunit.
 
 
  0.987
SFE87675.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
   
 
 0.903
SFE87208.1
TRAP transporter, DctM subunit.
     
  0.900
SFE87529.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.891
SFE54373.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.773
SFE88836.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.767
SFE54334.1
TRAP transporter, DctM subunit.
 
    0.754
SFE88871.1
TRAP transporter, DctM subunit.
 
    0.743
SFE87455.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit.
 
     0.675
SFE87385.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.525
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.