STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE88238.1Two-component system, OmpR family, response regulator TctD. (212 aa)    
Predicted Functional Partners:
SFE20880.1
PAS domain S-box-containing protein.
  
 0.990
SFF26256.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.990
SFE88200.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
 0.982
SFE96367.1
PAS domain S-box-containing protein.
  
 0.977
SFE88163.1
iron(III) transport system substrate-binding protein.
 
  
  0.932
SFE25876.1
Formate dehydrogenase.
   
 
 0.928
SFF29681.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 0.883
SFD98615.1
Two-component system, OmpR family, sensor kinase.
 
  0.848
SFF07937.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.833
SFF26136.1
Signal transduction histidine kinase.
 0.827
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.