STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE88716.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SFE88745.1
Hypothetical protein.
 
     0.957
SFE88777.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.894
SFE88805.1
Sulfate permease, SulP family.
 
    0.765
SFE88686.1
Transcriptional regulator, ArsR family.
 
     0.637
SFD68589.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
  
  
 0.503
SFE99059.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.490
SFE31292.1
TIGR01244 family protein.
       0.424
SFE35001.1
Sulfite reductase (NADPH) hemoprotein beta-component.
  
    0.416
SFE99085.1
Sulfide:quinone oxidoreductase.
 
     0.408
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.