STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE96392.1Uncharacterized conserved protein, DUF849 family. (274 aa)    
Predicted Functional Partners:
SFE96426.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
 
     0.847
SFE96449.1
Protocatechuate 3,4-dioxygenase, beta subunit.
 
     0.845
SFE96471.1
4-carboxymuconolactone decarboxylase.
       0.803
SFE96497.1
P-hydroxybenzoate 3-monooxygenase.
 
     0.695
SFE58201.1
3-oxoacid CoA-transferase subunit A.
    
 0.546
SFE96524.1
LysR family transcriptional regulator, pca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
 
     0.536
SFE58163.1
3-oxoacid CoA-transferase subunit B.
    
  0.532
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 
 0.505
SFE13146.1
Kynurenine formamidase.
  
    0.457
SFE64315.1
acyl-CoA thioester hydrolase.
 
 
 0.457
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.