STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE98090.1Type IV secretion system protein VirB5. (255 aa)    
Predicted Functional Partners:
SFF26256.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
  
 0.974
SFF07937.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
  
 0.969
SFE98045.1
TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.956
SFE98176.1
Type IV secretion system protein VirB4.
 
     0.951
SFE98202.1
Type IV secretion system protein VirB3.
 
     0.951
SFE98120.1
Transglycosylase SLT domain-containing protein.
 
    0.950
SFE97962.1
Type IV secretion system protein VirB10.
 
     0.947
SFE98016.1
Type IV secretion system protein VirB8.
 
     0.941
SFE97991.1
Type IV secretion system protein VirB9.
 
     0.940
SFE85419.1
Flagellar motor switch protein FliN/FliY.
  
 
 0.925
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.