STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF01944.1Tripartite-type tricarboxylate transporter, receptor component TctC. (312 aa)    
Predicted Functional Partners:
SFF02009.1
Putative tricarboxylic transport membrane protein.
 
  
 0.968
SFF24835.1
Putative tricarboxylic transport membrane protein.
 
  
 0.874
SFD95961.1
Putative tricarboxylic transport membrane protein.
 
  
 0.869
SFE88343.1
Putative tricarboxylic transport membrane protein.
 
  
 0.859
SFF01980.1
Hypothetical protein.
       0.773
SFD95919.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.768
SFF01906.1
Transcriptional regulator, GntR family.
 
     0.751
SFE88310.1
Putative tricarboxylic transport membrane protein.
 
  
 0.744
SFE88273.1
Putative tricarboxylic transport membrane protein.
  
     0.643
SFF01872.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
 
     0.538
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.