STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05299.1Dimethylglycine dehydrogenase; Belongs to the GcvT family. (833 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 0.997
SFE95904.1
Sarcosine oxidase subunit delta.
 
 0.996
SFE95845.1
Sarcosine oxidase subunit gamma.
 
 0.994
SFE95874.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.994
SFD47529.1
Sarcosine oxidase subunit delta.
 
 0.988
SFD47497.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.986
SFD47461.1
Sarcosine oxidase subunit gamma.
  
 0.979
SFD84897.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
0.967
SFE54116.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
0.967
SFD77164.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
0.966
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.