STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF04856.1SlyX protein. (64 aa)    
Predicted Functional Partners:
SFF04826.1
ATP phosphoribosyltransferase regulatory subunit.
 
     0.744
SFD56998.1
Hypothetical protein.
  
     0.705
SFF04794.1
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
       0.693
SFD78716.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.672
SFE31335.1
Hypothetical protein.
  
     0.670
SFD90017.1
Sulfotransferase family protein.
  
     0.636
SFE17638.1
Lipopolysaccharide export system protein LptC.
  
     0.626
SFE04164.1
Hypothetical protein.
  
     0.612
SFD60660.1
Rhomboid family protein.
  
     0.603
SFD48873.1
SseB protein N-terminal domain-containing protein.
  
     0.590
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.