STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF09407.1Glyoxylase, beta-lactamase superfamily II. (308 aa)    
Predicted Functional Partners:
SFF09430.1
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ.
       0.736
SFE99085.1
Sulfide:quinone oxidoreductase.
    
  0.726
SFD47497.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.717
SFE95874.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.717
SFD47889.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
  
     0.703
SFD68261.1
Hypothetical protein.
  
  0.585
SFD84323.1
Uncharacterized conserved protein, heparinase superfamily.
  
     0.564
SFE32258.1
Large terminase phage packaging protein.
  
     0.456
SFD48797.1
Rhodanese-related sulfurtransferase.
   
  0.439
SFE01953.1
Rhodanese-related sulfurtransferase.
   
  0.439
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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