STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF16500.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (260 aa)    
Predicted Functional Partners:
SFF12227.1
Cyclic nucleotide-binding domain-containing protein.
   
 0.770
SFF12270.1
Hypothetical protein.
   
 0.770
SFE18577.1
Glutamate synthase (NADPH) large subunit.
     
 0.742
SFF16461.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.737
SFE45209.1
Acyl transferase domain-containing protein.
  
 0.707
SFF16478.1
TRAP transporter, DctM subunit.
    
  0.701
SFE31835.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.684
SFF09744.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  0.650
SFF16446.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.642
SFF16415.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  0.639
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
Server load: high (92%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.