STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF18839.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily. (359 aa)    
Predicted Functional Partners:
SFF18812.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.998
SFF18776.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.996
SFD58094.1
Sorbitol ABC transporter membrane protein.
 
 0.988
SFF18725.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.987
SFD58135.1
Sorbitol ABC transporter membrane protein.
 
 0.973
SFF18750.1
Predicted small integral membrane protein.
 
    0.905
SFF18865.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  
 
0.902
SFD58058.1
Sorbitol-binding protein/mannitol-binding protein.
  
 0.898
SFF18889.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.813
SFF18918.1
Transcriptional regulator, DeoR family.
 
     0.598
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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