STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF20333.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SFF20353.1
Hypothetical protein.
 
     0.956
SFF20258.1
Protein of unknown function.
 
     0.884
SFF20308.1
Hypothetical protein.
 
     0.883
SFF20376.1
C-terminal domain on Strawberry notch homologue.
 
     0.868
SFF19595.1
Hypothetical protein.
  
     0.710
SFF19562.1
Hypothetical protein.
  
     0.703
SFF20192.1
Protein of unknown function.
  
     0.682
SFE98720.1
Methyltransferase domain-containing protein.
 
     0.679
SFF19829.1
P-type conjugative transfer protein VirB9.
  
     0.649
SFF19803.1
Type IV secretion system protein VirB8.
  
     0.640
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.