STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF24756.1DNA-binding transcriptional regulator, MarR family. (154 aa)    
Predicted Functional Partners:
SFF24731.1
Choline-sulfatase.
       0.779
SFF24711.1
Ribonuclease BN, tRNA processing enzyme.
       0.773
SFE56006.1
DNA-binding transcriptional regulator, MarR family.
  
     0.746
SFF24780.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.545
SFE76734.1
Transcriptional regulator, MarR family.
  
     0.513
SFF24810.1
Hypothetical protein.
       0.504
SFF24835.1
Putative tricarboxylic transport membrane protein.
       0.504
SFF24685.1
(2R)-phospho-3-sulfolactate synthase (ComA).
       0.479
SFF24860.1
Hypothetical protein.
       0.453
SFE30454.1
Sulfur dehydrogenase subunit SoxD.
   
 
  0.439
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.