STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF27991.1Segregation and condensation protein B. (216 aa)    
Predicted Functional Partners:
SFD73034.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.997
SFF28017.1
Protein of unknown function.
 
     0.934
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 
 0.759
SFF15169.1
Protein of unknown function.
 
     0.728
SFF27226.1
Protein of unknown function.
 
     0.724
SFF27276.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.721
SFF28043.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.715
cmk
Cytidylate kinase.
  
  
 0.572
der
GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.470
SFF21917.1
Replication initiation protein RepC.
  
     0.438
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.