STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF28473.1Sensors of blue-light using FAD. (144 aa)    
Predicted Functional Partners:
SFF26256.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.930
SFF07937.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.841
SFF09476.1
GAF domain-containing protein.
  
 0.837
SFE20880.1
PAS domain S-box-containing protein.
  
 0.833
SFE96367.1
PAS domain S-box-containing protein.
  
 0.785
SFE15417.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.742
SFD87179.1
Hypothetical protein.
  
 
 0.691
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
   
    0.645
SFF26136.1
Signal transduction histidine kinase.
  
 
 0.619
SFF25869.1
PAS domain S-box-containing protein.
  
 0.558
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.