Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nodINodulation ATP-binding protein I. (301 aa)    
Predicted Functional Partners:
ADW20683.1
ABC-type multidrug transport system permease component.
 
  
 0.936
ADW20849.1
Putative ABC-2 type transporter, permease protein.
 
     0.927
ADW20712.1
ABC transporter, ATP-binding protein.
 
    
0.919
ADW20848.1
Transporter.
       0.781
ADW20851.1
MazG nucleotide pyrophosphohydrolase.
       0.781
ADW20852.1
Conserved hypothetical protein.
       0.558
ADW21972.1
ABC-2 type transporter superfamily.
  
     0.557
ADW20853.1
Conserved hypothetical protein.
       0.516
ADW21971.1
Putative membrane protein.
  
     0.511
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
       0.440
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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