STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW20940.1Putative epimerase/dehydratase WbiI. (606 aa)    
Predicted Functional Partners:
spsC
Spore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.986
ADW20937.1
Sugar transferase involved in lipopolysaccharide synthesis.
 
  
 0.937
rfpB
Putative galactosyltransferase.
 
  
 0.846
ADW20938.1
Acetyltransferase with multiple hexapeptide repeat domains.
 
     0.771
ADW20935.1
Glycosyltransferase.
 
  
 0.754
ADW20932.1
Rhamnosyl transferase.
  
  
 0.705
ADW20930.1
O-antigen transporter.
  
  
 0.699
ADW20926.1
O-antigen polymerase family.
  
  
 0.638
ADW20934.1
Putative membrane protein.
       0.596
ADW20933.1
Glycosyl transferase group 1.
 
  
 0.590
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.