STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW21006.13-oxoadipate enol-lactonase. (236 aa)    
Predicted Functional Partners:
ADW21008.1
SUF system FeS assembly protein, NifU family.
     
 0.798
ADW21007.1
Conserved hypothetical protein.
       0.795
ADW21239.1
Metallophosphoesterase.
   
  0.790
csd
SCL; selenocysteine beta-lyase; selenocysteine reductase; selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.765
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.689
copB
Putative copper-transporting P-type ATPase B.
       0.534
ADW21011.1
Multicopper oxidase family protein.
       0.533
ADW21974.1
Transporter, major facilitator family.
  
     0.462
ADW21012.1
Domain of unknown function superfamily.
       0.426
birA
biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.407
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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