STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potB1Spermidine/putrescine transport system permease protein PotB. (286 aa)    
Predicted Functional Partners:
ADW21383.1
Spermidine/putrescine-binding periplasmic protein; Spbp.
 
 
 0.995
potA1
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 0.994
ADW21382.1
Spermidine/putrescine ABC transporter, permease protein.
 
0.993
ADW21900.1
Spermidine/putrescine-binding periplasmic protein; Spbp.
 
 
 0.978
potA2
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 0.973
potC
Spermidine/putrescine ABC transporter, permease protein PotC.
 
0.965
potB2
Spermidine/putrescine transport system permease protein PotB.
  
  
 
0.908
ADW21906.1
ABC transporter permease protein.
  
 0.889
potA3
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 0.870
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
    0.783
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.