STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW21526.13-hbdh; 3-hydroxybutyrate dehydrogenase; bdh. (249 aa)    
Predicted Functional Partners:
ADW22554.1
hydroxymethylglutaryl-CoA lyase like protein.
   
 
  0.901
ADW21527.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
       0.752
livG2
Branched-chain amino acid transport ATP-binding protein LivG.
       0.744
ADW21529.1
Branched amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
       0.743
ADW21532.1
MaoC domain protein dehydratase.
  
 0.723
livH1
Branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
       0.722
ADW21531.1
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
   
   0.693
ADW21536.1
Beta-ketoacyl-acyl-carrier-protein synthase I.
  
  
 0.693
ADW21533.1
Putative hydrolase.
  
 
 0.681
ADW21534.1
3-oxoadipate enol-lactone hydrolase.
  
 
 0.681
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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