STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW22302.1Putative periplasmic solute binding protein. (210 aa)    
Predicted Functional Partners:
ADW22524.1
Mn2+/Zn2+ ABC transporter, ATP-binding protein.
 
 
 0.990
ADW22523.1
Mn2+/Zn2+ ABC transporter, permease protein.
 
 
 0.989
ADW21914.1
ABC transporter solute-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 
0.925
ADW22300.1
Hypothetical protein.
       0.678
ADW22301.1
Hypothetical protein.
       0.572
rpsN
30S ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.548
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.542
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.405
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.