STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW22525.1ABC transporter, permease/ATP-binding protein, HlyB family. (607 aa)    
Predicted Functional Partners:
ADW20849.1
Putative ABC-2 type transporter, permease protein.
 
 0.550
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.548
ADW21971.1
Putative membrane protein.
 
 0.534
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.532
ADW22524.1
Mn2+/Zn2+ ABC transporter, ATP-binding protein.
 
    
0.510
ADW21972.1
ABC-2 type transporter superfamily.
 
 0.504
nodI
Nodulation ATP-binding protein I.
 
0.497
ADW21970.1
ABC transporter ATP-binding protein.
 
0.488
ADW22522.1
Rrf2 family protein, transcriptional regulator.
       0.480
ADW22523.1
Mn2+/Zn2+ ABC transporter, permease protein.
       0.480
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.