Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADW22528.1Conserved hypothetical protein. (345 aa)    
Predicted Functional Partners:
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.805
ADW22459.1
Putative oxidoreductase.
  
     0.772
ADW21410.1
Conserved hypothetical protein.
  
     0.771
ADW23067.1
Putative membrane protein.
  
     0.766
ADW21133.1
Putative lipoprotein.
  
     0.763
ADW20889.1
Conserved hypothetical protein.
  
     0.762
ADW22432.1
Conserved hypothetical protein.
  
     0.761
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.753
ADW21048.1
Putative transporter.
  
     0.742
ADW21013.1
Conserved hypothetical protein.
 
    0.740
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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