Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADW22529.1Tetratricopeptide TPR_2. (450 aa)    
Predicted Functional Partners:
ADW22421.1
Outer membrane chaperone Skp.
  
 
   0.827
ADW22695.1
Cytochrome c family protein.
 
 
 0.813
ADW20889.1
Conserved hypothetical protein.
 
  
 0.791
ADW21276.1
Putative Ig domain family.
 
 
 0.786
ADW22432.1
Conserved hypothetical protein.
 
   
 0.784
atpC
ATP synthase, subunit (C/AC39); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
  
  0.779
ADW21133.1
Putative lipoprotein.
  
     0.774
ADW22628.1
Conserved hypothetical protein.
  
     0.774
ADW20967.1
Putative acetyltransferase.
  
     0.773
ADW21410.1
Conserved hypothetical protein.
  
     0.773
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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