STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appDOligopeptide transport ATP-binding protein AppD; Belongs to the ABC transporter superfamily. (339 aa)    
Predicted Functional Partners:
gsiD2
Glutathione transport system permease protein GsiD.
 
 0.989
gsiD3
Glutathione transport system permease protein GsiD.
 
 0.989
gsiD4
Glutathione transport system permease protein GsiD.
 
 0.978
gsiD1
Glutathione transport system permease protein GsiD.
 
 0.967
ADW22579.1
Peptide ABC transporter, permease protein.
 
 0.963
appB1
Oligopeptide transport system permease protein AppB.
 
 
 0.962
appC
Oligopeptide transport system permease protein AppC.
 
 0.938
ADW21692.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.900
ADW21820.1
Putative peptide ABC transporter permease protein y4tP.
 
 
 0.900
appB2
Oligopeptide transport system permease protein AppB.
 
 
 0.899
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.