STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appDOligopeptide transport ATP-binding protein AppD; Belongs to the ABC transporter superfamily. (339 aa)    
Predicted Functional Partners:
gsiD2
Glutathione transport system permease protein GsiD.
  
 0.987
gsiD3
Glutathione transport system permease protein GsiD.
  
 0.987
appF
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
  
 
0.982
gsiD4
Glutathione transport system permease protein GsiD.
  
 0.974
gsiD1
Glutathione transport system permease protein GsiD.
  
 0.961
appB1
Oligopeptide transport system permease protein AppB.
 
 0.959
ADW22579.1
Peptide ABC transporter, permease protein.
  
 0.958
appC
Oligopeptide transport system permease protein AppC.
  
 0.926
ADW21692.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.890
ADW21820.1
Putative peptide ABC transporter permease protein y4tP.
 
 0.890
Your Current Organism:
Thermus scotoductus
NCBI taxonomy Id: 743525
Other names: T. scotoductus SA-01, Thermus scotoductus SA-01, Thermus scotoductus str. SA-01, Thermus scotoductus strain SA-01, Thermus sp. SA-01
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