STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG42839.1KEGG: xce:Xcel_0020 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase. (484 aa)    
Predicted Functional Partners:
AEG42840.1
PFAM: Cell cycle protein; KEGG: xce:Xcel_0021 cell cycle protein; Belongs to the SEDS family.
 
 0.999
AEG44058.1
KEGG: xce:Xcel_1283 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 0.965
AEG42842.1
KEGG: xce:Xcel_0023 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated.
 
   
 0.955
AEG44053.1
KEGG: xce:Xcel_1278 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
  
  
0.945
AEG42843.1
KEGG: xce:Xcel_0024 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated.
 
   
 0.936
AEG42841.1
KEGG: xce:Xcel_0022 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related.
  
 0.919
AEG44061.1
PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: xce:Xcel_1286 cell division protein FtsQ.
  
 
 0.916
AEG42837.1
PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: xce:Xcel_0018 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA.
 
   
 0.909
AEG42838.1
KEGG: xce:Xcel_0019 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain.
     
 0.848
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
   
 
 0.821
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.