STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG42991.1Lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: scb:SCAB_70541 lipolytic protein. (278 aa)    
Predicted Functional Partners:
AEG43270.1
KEGG: apn:Asphe3_04010 FG-GAP repeat protein.
 
 0.977
AEG43298.1
KEGG: pjd:Pjdr2_5542 lipolytic protein G-D-S-L family.
     0.972
AEG43920.1
Pectate disaccharide-lyase; KEGG: ddd:Dda3937_00143 exopolygalacturonate lyase PelX.
 
   0.828
AEG43400.1
KEGG: pjd:Pjdr2_5542 lipolytic protein G-D-S-L family.
   0.813
AEG44467.1
PFAM: Protein of unknown function DUF1593; Cadherin; KEGG: rbi:RB2501_13119 hypothetical protein.
 
 
 0.762
AEG44466.1
PFAM: Protein of unknown function DUF1593; KEGG: bfa:Bfae_00550 hypothetical protein.
 
 
 0.754
AEG45009.1
Alpha-L-fucosidase; KEGG: xce:Xcel_1192 hypothetical protein.
  
 
   0.726
AEG43584.1
PFAM: Glycoside hydrolase, family 43; KEGG: jde:Jden_0510 glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.710
AEG43301.1
PFAM: Pectate lyase/Amb allergen; KEGG: nda:Ndas_5013 pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen.
 
     0.692
AEG43589.1
KEGG: jde:Jden_0516 arabinan endo-1,5-alpha-L-arabinosidase; PFAM: Glycoside hydrolase, family 43.
 
     0.691
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.