STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43231.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mjl:Mjls_1962 extracellular solute-binding protein. (350 aa)    
Predicted Functional Partners:
AEG43232.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2027 binding-protein-dependent transport systems inner membrane component.
 
 
 0.996
AEG43233.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 
 0.993
AEG43230.1
KEGG: msm:MSMEG_2469 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
 
     0.936
AEG45510.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0179 binding-protein-dependent transport systems inner membrane component.
  
  
 0.723
AEG43234.1
Protein of unknown function UPF0027; PFAM: Uncharacterised protein family UPF0027; KEGG: kra:Krad_1410 hypothetical protein.
       0.639
AEG43229.1
KEGG: cwo:Cwoe_2455 4'-phosphopantetheinyl transferase.
       0.556
AEG44428.1
Major facilitator superfamily MFS_1; KEGG: aai:AARI_07080 MFS superfamily transporter; manually curated; PFAM: Major facilitator superfamily MFS-1.
  
  
 0.554
AEG44794.1
PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2255 major facilitator superfamily protein.
  
  
 0.554
AEG45509.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_0180 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
  
 0.515
AEG43649.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: psa:PST_1474 chemotaxis protein MotB-related protein.
    
   0.454
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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