STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43239.1Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_2822 ABC transporter-like protein; SMART: ATPase, AAA+ type, core. (243 aa)    
Predicted Functional Partners:
AEG43238.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: xce:Xcel_2823 hypothetical protein.
  
 0.947
AEG45196.1
KEGG: xce:Xcel_2673 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
    
0.912
AEG45146.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: xce:Xcel_2604 hypothetical protein.
 
 0.904
AEG44942.1
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.898
AEG42941.1
KEGG: xce:Xcel_0100 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
    0.825
AEG43021.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_0145 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
     
0.799
AEG43708.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: bcv:Bcav_1557 protein of unknown function DUF214.
  
 
 0.797
AEG45602.1
KEGG: ica:Intca_0184 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
    
0.750
AEG43237.1
KEGG: kra:Krad_3736 hypothetical protein.
       0.746
AEG45560.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: ske:Sked_36180 multidrug ABC transporter ATPase; SMART: ATPase, AAA+ type, core.
    
0.742
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.