STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43285.1PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ske:Sked_13130 anti-anti-sigma regulatory factor. (113 aa)    
Predicted Functional Partners:
AEG43111.1
Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; ATP-binding region, ATPase-like; KEGG: xce:Xcel_3140 protein serine/threonine phosphatase; SMART: Protein phosphatase 2C-related.
  
 
 0.959
AEG45583.1
KEGG: xce:Xcel_3278 protein serine phosphatase with GAF(s) sensor(s); PFAM: Sporulation stage II, protein E C-terminal; GAF; ATP-binding region, ATPase-like; SMART: Protein phosphatase 2C-related; GAF.
  
 
 0.959
AEG43284.1
PFAM: ATP-binding region, ATPase-like; KEGG: ske:Sked_11800 histidine kinase.
  
 
 0.905
AEG43281.1
PFAM: ATP-binding region, ATPase-like; KEGG: ske:Sked_11800 histidine kinase.
  
 
 0.597
AEG43283.1
Putative PAS/PAC sensor protein; KEGG: ske:Sked_13140 bacteriophytochrome; PFAM: Sporulation stage II, protein E C-terminal; GAF; PAS fold-2; Phytochrome, central region; SMART: Protein phosphatase 2C-related; GAF.
  
 
 0.557
AEG43544.1
Protein serine/threonine phosphatase; KEGG: nfa:nfa2970 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related.
  
   0.504
AEG44038.1
KEGG: xce:Xcel_1263 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Protein phosphatase 2C-related.
  
   0.504
AEG44317.1
Putative PAS/PAC sensor protein; KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; SMART: Protein phosphatase 2C-related.
  
   0.504
AEG43286.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: xce:Xcel_0895 xylose isomerase domain-containing protein.
       0.445
AEG43287.1
PFAM: Protein of unknown function DUF993; KEGG: bcv:Bcav_3366 protein of unknown function DUF993.
       0.445
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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