STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43389.1RDD domain containing protein; PFAM: RDD; Forkhead-associated; KEGG: xce:Xcel_0488 FHA domain containing protein. (499 aa)    
Predicted Functional Partners:
AEG45048.1
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: xce:Xcel_2487 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain.
    
 
 0.979
AEG43388.1
KEGG: xce:Xcel_0487 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like.
 
     0.947
AEG43387.1
PFAM: Protein of unknown function DUF58; KEGG: xce:Xcel_0486 hypothetical protein.
 
     0.946
AEG43391.1
PFAM: Forkhead-associated; KEGG: xce:Xcel_0490 FHA domain containing protein.
 
     0.946
AEG43385.1
KEGG: xce:Xcel_0427 fibronectin type III domain-containing protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III.
 
     0.911
AEG43393.1
KEGG: ske:Sked_07560 hypothetical protein.
 
     0.901
AEG43392.1
PFAM: Serine/threonine-protein kinase-like domain; KEGG: xce:Xcel_0491 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain.
 
 
   0.897
AEG42837.1
PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: xce:Xcel_0018 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA.
   
 
 0.871
AEG43395.1
KEGG: cfl:Cfla_1419 FHA domain containing protein; PFAM: Cell divisionFtsK/SpoIIIE; Forkhead-associated; SMART: Forkhead-associated; ATPase, AAA+ type, core.
 
     0.871
AEG44558.1
PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: xce:Xcel_1997 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA.
   
 
 0.871
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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