STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43425.1PFAM: ABC-2 type transporter; KEGG: cfl:Cfla_2681 ABC-2 type transporter. (285 aa)    
Predicted Functional Partners:
AEG43426.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_0609 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 0.967
AEG43424.1
KEGG: xce:Xcel_0607 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like.
 
    0.861
AEG43423.1
KEGG: xce:Xcel_0606 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
     0.802
AEG43422.1
PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: xce:Xcel_0605 adenosine deaminase.
       0.724
AEG45426.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: bcv:Bcav_1585 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 0.633
AEG45415.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_3320 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 0.608
AEG45280.1
PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter.
 
  
  0.595
AEG45279.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: bcv:Bcav_1235 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like.
  
 0.594
AEG43636.1
PFAM: ABC transporter-like; KEGG: rha:RHA1_ro02602 ABC transporter, ATP-binding component.
 
  
 0.539
AEG45376.1
PFAM: Nitroreductase-like; KEGG: xce:Xcel_3014 nitroreductase.
 
    0.511
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.