STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43627.1PFAM: Domain of unknown function DUF1918; Protein of unknown function DUF1876; KEGG: xce:Xcel_0903 hypothetical protein. (177 aa)    
Predicted Functional Partners:
AEG42958.1
PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: xce:Xcel_0111 activator of HSP90 ATPase 1 family protein.
  
     0.730
AEG44186.1
PFAM: Protein of unknown function DUF457, transmembrane; KEGG: xce:Xcel_1445 membrane-bound metal-dependent hydrolase.
  
     0.663
AEG43391.1
PFAM: Forkhead-associated; KEGG: xce:Xcel_0490 FHA domain containing protein.
  
     0.620
AEG43388.1
KEGG: xce:Xcel_0487 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like.
  
     0.592
AEG43628.1
ABC-type transporter, periplasmic subunit family 3; KEGG: ami:Amir_6884 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3.
       0.588
AEG43385.1
KEGG: xce:Xcel_0427 fibronectin type III domain-containing protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III.
  
     0.586
AEG43629.1
KEGG: kfl:Kfla_5002 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component.
       0.536
AEG43630.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: ami:Amir_6886 ABC transporter; SMART: ATPase, AAA+ type, core.
       0.536
AEG44041.1
KEGG: xce:Xcel_1266 hypothetical protein.
  
    0.534
AEG43626.1
ABC-type transporter, integral membrane subunit; KEGG: mil:ML5_5623 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component.
       0.524
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.