STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43642.1PFAM: Aldehyde dehydrogenase; KEGG: xce:Xcel_0913 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (507 aa)    
Predicted Functional Partners:
AEG43643.1
PFAM: Protein of unknown function DUF779; KEGG: xce:Xcel_0914 hypothetical protein.
 
    0.950
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.932
AEG43885.1
KEGG: ica:Intca_0899 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like.
  
 
 0.920
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.918
AEG44274.1
Acylphosphatase; KEGG: bcv:Bcav_0496 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like.
    
 0.904
AEG44690.1
KEGG: mva:Mvan_1643 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.904
AEG43641.1
Putative phytochrome sensor protein; PFAM: GAF; Signal transduction response regulator, C-terminal; KEGG: cfl:Cfla_0169 putative phytochrome sensor protein.
 
 
 
 0.747
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.587
AEG44118.1
KEGG: xce:Xcel_1337 hypothetical protein.
   
 0.495
AEG44429.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; KEGG: bcv:Bcav_0869 hypothetical protein; PFAM: Fumarylacetoacetase, C-terminal-like; Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase.
  
 
 0.470
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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