STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43708.1PFAM: Protein of unknown function DUF214, permase predicted; KEGG: bcv:Bcav_1557 protein of unknown function DUF214. (932 aa)    
Predicted Functional Partners:
AEG43709.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: bcv:Bcav_1556 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.980
AEG43710.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: bcv:Bcav_1555 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.968
AEG43707.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: bcv:Bcav_1558 protein of unknown function DUF214.
       0.820
AEG43239.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_2822 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 
 0.797
AEG45145.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: xce:Xcel_2603 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 
 0.797
AEG43705.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_26190 dipeptide/oligopeptide/nickel ABC transporter permease.
  
    0.779
AEG43706.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: ske:Sked_26180 ABC transporter ATPase; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
    0.776
AEG45494.1
KEGG: xce:Xcel_0188 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.
   
    0.620
AEG43704.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0786 binding-protein-dependent transport systems inner membrane component.
       0.601
AEG43651.1
KEGG: cmi:CMM_0491 hypothetical protein.
 
    0.584
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.