STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43813.1KEGG: nda:Ndas_3912 transmembrane protein. (122 aa)    
Predicted Functional Partners:
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.723
AEG43812.1
KEGG: xce:Xcel_1059 metal-dependent hydrolase of the beta-lactamase superfamily III.
       0.723
AEG45447.1
KEGG: rmu:RMDY18_11690 nicotinamide mononucleotide transporter; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC.
 
     0.551
AEG44571.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: xce:Xcel_2010 Rieske (2Fe-2S) domain-containing protein.
  
     0.463
AEG43060.1
PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; Copper resistance D; KEGG: xce:Xcel_3220 copper resistance D domain-containing protein.
  
     0.447
AEG43810.1
PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: kfl:Kfla_1534 alcohol dehydrogenase zinc-binding domain-containing protein.
       0.434
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.