STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44124.1PFAM: Thiamin pyrophosphokinase, catalytic domain; KEGG: xce:Xcel_1343 thiamin pyrophosphokinase catalytic region. (397 aa)    
Predicted Functional Partners:
AEG44125.1
KEGG: xce:Xcel_1344 hypothetical protein.
 
  
 0.975
AEG44126.1
KEGG: xce:Xcel_1345 hypothetical protein.
 
     0.926
AEG44127.1
Virulence factor MVIN family protein; PFAM: Flagellin assembly, membrane protein MviN; KEGG: xce:Xcel_1346 virulence factor MviN family protein.
 
     0.902
AEG44121.1
TIGRFAM: Haemolysin A; PFAM: RNA-binding S4; Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: xce:Xcel_1340 hemolysin A; SMART: RNA-binding S4.
       0.828
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.828
AEG44123.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.828
AEG44295.1
KEGG: xce:Xcel_1784 hypothetical protein.
 
     0.792
AEG45537.1
PFAM: Glycosyl transferase, family 2; KEGG: xce:Xcel_3245 glycosyl transferase family 2 protein.
 
     0.782
AEG44120.1
Hypothetical protein.
       0.773
AEG45536.1
KEGG: xce:Xcel_3244 hypothetical protein.
 
     0.684
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.