STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44415.1PFAM: CDP-alcohol phosphatidyltransferase; KEGG: xce:Xcel_1658 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (210 aa)    
Predicted Functional Partners:
AEG45680.1
KEGG: xce:Xcel_3359 inositol 1-phosphate synthase; TIGRFAM: Myo-inositol 1-phosphate synthase, actinobacteria; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like.
 
  
 0.974
AEG44414.1
PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: xce:Xcel_1659 lipid A biosynthesis acyltransferase.
  
 0.972
AEG44890.1
KEGG: mil:ML5_5774 myo-inositol-1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like.
 
  
 0.933
AEG44533.1
KEGG: xce:Xcel_1925 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase.
  
 
 0.919
AEG44413.1
Phosphatidylinositol alpha-mannosyltransferase; KEGG: xce:Xcel_1660 glycosyl transferase group 1 protein; PFAM: Glycosyl transferase, group 1.
 
  
 0.903
AEG44416.1
PFAM: Histidine triad (HIT) protein; KEGG: xce:Xcel_1657 histidine triad (HIT) protein.
  
  
 0.864
thrS
KEGG: cfl:Cfla_1783 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.837
AEG44412.1
KEGG: xce:Xcel_1661 hypothetical protein.
 
     0.830
pdxS
Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
     
 0.680
AEG44010.1
Helix-turn-helix domain protein; KEGG: xce:Xcel_1238 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
    0.664
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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