STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44436.1KEGG: aai:AARI_04300 metallophosphoesterase domain-containing protein. (603 aa)    
Predicted Functional Partners:
AEG43667.1
Ankyrin; KEGG: kfl:Kfla_2966 hypothetical protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat.
 
 
 
 0.613
AEG43790.1
Ankyrin; KEGG: req:REQ_01790 hypothetical protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat.
   
 
 0.559
AEG44423.1
KEGG: bpf:BpOF4_09425 zinc carboxypeptidase; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A.
  
     0.518
AEG44435.1
PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: nfa:nfa49930 hypothetical protein.
  
    0.476
AEG44432.1
TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD; KEGG: mlu:Mlut_20010 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.436
AEG44433.1
TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: nfa:nfa27750 putative hydratase; PFAM: Fumarylacetoacetase, C-terminal-like.
       0.436
AEG44434.1
4-hydroxy-2-oxovalerate aldolase; KEGG: mts:MTES_0679 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.436
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.