STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44460.1H(+)-transporting two-sector ATPase; KEGG: nfa:nfa20990 putative cation transporter; PFAM: Cation transporter. (475 aa)    
Predicted Functional Partners:
AEG43341.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; KEGG: cfl:Cfla_2747 TrkA-N domain protein.
 
 0.941
AEG45069.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Cation/H+ exchanger; KEGG: hel:HELO_3435 sodium/hydrogen exchanger.
  
 
 0.783
AEG44526.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: xce:Xcel_1918 TrkA-N domain-containing protein.
  
 
 0.722
AEG44525.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: xce:Xcel_1917 TrkA-N domain-containing protein.
  
 
 0.712
AEG44461.1
KEGG: bcv:Bcav_3779 osmosensitive K channel His kinase sensor; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
     
 0.589
AEG44462.1
Two component transcriptional regulator, winged helix family; KEGG: ske:Sked_27020 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region.
       0.514
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.