STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44551.1PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein. (464 aa)    
Predicted Functional Partners:
AEG44225.1
KEGG: xce:Xcel_1503 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
 0.470
AEG44959.1
PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: xce:Xcel_2412 electron transfer flavoprotein subunit alpha/beta.
  
 
 0.459
AEG44958.1
PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: xce:Xcel_2411 electron transfer flavoprotein subunit alpha.
  
 
 0.458
AEG44550.1
KEGG: xce:Xcel_1989 hypothetical protein.
       0.449
AEG44570.1
PFAM: Cytochrome c, class I; KEGG: xce:Xcel_2009 cytochrome c class I.
   
   0.439
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.