STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44682.1ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1782 fructose-bisphosphate aldolase. (551 aa)    
Predicted Functional Partners:
AEG44683.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: cfl:Cfla_2174 extracellular solute-binding protein family 1.
 0.997
AEG44681.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1783 binding-protein-dependent transport systems inner membrane component.
 0.995
AEG43215.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3079 binding-protein-dependent transport systems inner membrane component.
 0.981
AEG43213.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bcv:Bcav_3077 extracellular solute-binding protein family 1.
 0.977
AEG44680.1
KEGG: xce:Xcel_2159 alpha amylase catalytic subunit; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
    0.934
AEG45323.1
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: xce:Xcel_2950 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 0.933
AEG43214.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3078 fructose-bisphosphate aldolase.
  
  
 
0.902
AEG44679.1
Triacylglycerol lipase; KEGG: stp:Strop_3165 hypothetical protein; PFAM: Lipase, GDSL.
       0.689
AEG45153.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_08400 carbohydrate ABC transporter membrane protein.
  
   0.653
AEG45151.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bcv:Bcav_2837 extracellular solute-binding protein family 1.
 
   0.609
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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