STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44848.1Glycosyl hydrolase family 32 domain protein; KEGG: ppm:PPSC2_c2714 cycloinulo-oligosaccharide fructanotransferase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; SMART: Glycoside hydrolase, family 32; LamG-like jellyroll fold. (1438 aa)    
Predicted Functional Partners:
AEG44850.1
Fructan beta-fructosidase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; KEGG: art:Arth_0425 levanase; SMART: Glycoside hydrolase, family 32; Belongs to the glycosyl hydrolase 32 family.
 
    
0.658
AEG44849.1
Fructokinase; KEGG: bcv:Bcav_1099 fructokinase; PFAM: Carbohydrate/purine kinase.
 
  
 0.628
AEG44851.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: art:Arth_0426 extracellular solute-binding protein.
 
     0.591
AEG44854.1
KEGG: art:Arth_0429 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI.
 
    0.456
AEG45135.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_31540 sugar ABC transporter periplasmic protein.
 
     0.405
AEG44852.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0427 binding-protein-dependent transport systems inner membrane component.
 
     0.404
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.