STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG44994.1PFAM: Major facilitator superfamily MFS-1; KEGG: bln:Blon_2472 major facilitator superfamily MFS_1. (440 aa)    
Predicted Functional Partners:
AEG44987.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: ppg:PputGB1_2662 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
     0.592
AEG44995.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mjl:Mjls_1828 extracellular solute-binding protein.
 
     0.582
AEG44989.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_5789 dipeptide/oligopeptide ABC transporter, permease protein.
 
     0.572
AEG44990.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: req:REQ_45420 oligopeptide/dipeptide abc transporter substrate binding lipoprotein.
 
     0.572
AEG44988.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_10080 ABC transporter permease protein.
 
     0.571
AEG44991.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3622 binding-protein-dependent transport systems inner membrane component.
       0.510
AEG44992.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3623 binding-protein-dependent transport systems inner membrane component.
       0.510
AEG44993.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: mjl:Mjls_1824 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
       0.510
AEG44986.1
TIGRFAM: Urease, alpha/gamma subunit; KEGG: nml:Namu_0268 urease subunit gamma; PFAM: Urease, alpha/gamma subunit; Belongs to the urease gamma subunit family.
       0.507
AEG44996.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: mva:Mvan_3024 putative agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
 
     0.462
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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