STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG45090.1KEGG: art:Arth_0896 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase. (605 aa)    
Predicted Functional Partners:
AEG42879.1
Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: aau:AAur_3482 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase.
  
  
 
0.925
AEG43499.1
Carboxylate-amine ligase ybdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.913
AEG44508.1
Carboxylate-amine ligase ybdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.913
AEG44773.1
Carboxylate-amine ligase ybdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.913
AEG43490.1
Peroxiredoxin; KEGG: xce:Xcel_0671 glutathione peroxidase; PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.912
pepA
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.911
AEG43848.1
TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; KEGG: ske:Sked_24580 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal.
     
 0.901
pxpA
UPF0271 protein ybgL; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
     
  0.900
AEG44609.1
TIGRFAM: Glutamine synthetase type I; KEGG: xce:Xcel_2038 glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp.
     
 0.868
AEG44225.1
KEGG: xce:Xcel_1503 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
 0.858
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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