STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG45135.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_31540 sugar ABC transporter periplasmic protein. (429 aa)    
Predicted Functional Partners:
AEG45134.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_31530 carbohydrate ABC transporter membrane protein.
 
 0.997
AEG45133.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_31520 carbohydrate ABC transporter membrane protein.
 
 0.993
AEG45323.1
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: xce:Xcel_2950 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 0.913
AEG45497.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aai:AARI_01990 putative xylobiose ABC transporter inner membrane subunit BxlF.
 
 0.909
AEG42933.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bll:BLJ_1931 binding-protein-dependent transporter inner membrane component.
 
  0.892
AEG44475.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_4750 binding-protein-dependent transport systems inner membrane component.
  
 0.887
AEG42934.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bll:BLJ_1930 binding-protein-dependent transporter inner membrane component.
  
 0.880
AEG44476.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7002 ABC transporter, permease protein.
  
 0.880
AEG45496.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aai:AARI_02000 putative xylobiose ABC transporter inner membrane subunit BxlG.
  
 0.880
AEG45136.1
Alpha-galactosidase; KEGG: ske:Sked_31550 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D.
 
    0.824
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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