STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG45424.1PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: bcv:Bcav_1587 histidine kinase. (437 aa)    
Predicted Functional Partners:
AEG45423.1
KEGG: bcv:Bcav_1588 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 0.996
AEG45425.1
PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1586 ABC-2 type transporter.
 
    0.852
AEG45142.1
Two component transcriptional regulator, LuxR family; KEGG: ske:Sked_08490 CheY-like receiver domain/HTH DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
 0.832
AEG43419.1
KEGG: bcv:Bcav_0102 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region.
 
 0.827
AEG45600.1
KEGG: xce:Xcel_0759 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
 0.815
AEG44459.1
KEGG: fri:FraEuI1c_6754 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
   0.802
AEG43423.1
KEGG: xce:Xcel_0606 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
 0.797
AEG43884.1
KEGG: xce:Xcel_0244 LuxR family two component transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region.
 
 
 0.786
AEG45426.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: bcv:Bcav_1585 ABC transporter related; SMART: ATPase, AAA+ type, core.
    0.775
AEG43631.1
Two component transcriptional regulator, LuxR family; KEGG: ske:Sked_25620 CheY-like receiver domain/HTH DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
 
 0.755
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.