STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG45531.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: xce:Xcel_3237 extracellular solute-binding protein family 1 protein. (467 aa)    
Predicted Functional Partners:
AEG45529.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_01770 carbohydrate ABC transporter membrane protein.
 
 0.993
AEG45530.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_01760 carbohydrate ABC transporter membrane protein.
 
  0.989
AEG45323.1
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: xce:Xcel_2950 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 0.921
AEG45519.1
PFAM: N-acylglucosamine 2-epimerase; KEGG: ske:Sked_10140 N-acyl-D-glucosamine 2-epimerase.
     0.638
map-2
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.477
AEG44475.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_4750 binding-protein-dependent transport systems inner membrane component.
  
 
 0.460
AEG45134.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_31530 carbohydrate ABC transporter membrane protein.
  
 
 0.460
AEG45497.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aai:AARI_01990 putative xylobiose ABC transporter inner membrane subunit BxlF.
  
 
 0.460
AEG42865.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_3242 sugar ABC transporter permease.
  
 
 0.429
AEG42934.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bll:BLJ_1930 binding-protein-dependent transporter inner membrane component.
  
 
 0.429
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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