STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHB67923.1PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: gym:GYMC10_5161 activator of HSP90 ATPase 1 family protein. (153 aa)    
Predicted Functional Partners:
EHB67924.1
KEGG: gym:GYMC10_5160 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.597
EHB68540.1
KEGG: gym:GYMC10_6140 hypothetical protein.
  
     0.570
EHB64016.1
KEGG: gym:GYMC10_2665 hypothetical protein.
  
     0.516
EHB66930.1
PFAM: regulatory protein TetR; KEGG: bbe:BBR47_14290 putative transcriptional regulator.
  
     0.482
EHB66679.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: gym:GYMC10_3176 copper amine oxidase domain protein.
  
     0.472
EHB65912.1
KEGG: gym:GYMC10_6159 hypothetical protein.
  
     0.466
EHB68318.1
KEGG: gym:GYMC10_4671 transcriptional regulator, TetR family.
  
     0.459
EHB66994.1
KEGG: gym:GYMC10_3840 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
  
     0.458
EHB64062.1
PFAM: regulatory protein TetR; KEGG: gym:GYMC10_2564 transcriptional regulator, TetR family.
  
     0.420
EHB66649.1
KEGG: gym:GYMC10_3359 putative NADH-flavin reductase-like protein.
  
     0.418
Your Current Organism:
Paenibacillus lactis
NCBI taxonomy Id: 743719
Other names: P. lactis 154, Paenibacillus lactis 154, Paenibacillus lactis str. 154, Paenibacillus lactis strain 154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.