STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHB62540.1KEGG: gym:GYMC10_3312 hypothetical protein. (289 aa)    
Predicted Functional Partners:
EHB59594.1
TIGRFAM: beta-galactosidase; KEGG: bpf:BpOF4_18015 beta-glucosidase; PFAM: glycoside hydrolase family 1.
   
   0.694
EHB65277.1
KEGG: ptm:GSPATT00018272001 hypothetical protein.
  
  
 0.510
EHB65258.1
KEGG: cth:Cthe_2479 Lj928 prophage protein.
   
   0.500
EHB50114.1
Hypothetical protein; KEGG: ljo:LJ0314 Lj965 prophage major head protein.
   
   0.500
EHB62978.1
Hypothetical protein; KEGG: pjd:Pjdr2_1173 S-layer domain protein.
   
   0.446
EHB62803.1
KEGG: gym:GYMC10_1123 hypothetical protein.
   
   0.446
EHB59657.1
Exosporium BclB-like protein; KEGG: aac:Aaci_2505 collagen triple helix repeat protein; TIGRFAM: Exosporium BclB-like; PFAM: Collagen triple helix repeat-containing protein.
   
   0.446
EHB67077.1
PFAM: glycoside hydrolase family 28; KEGG: gym:GYMC10_2830 glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
   
   0.417
EHB65276.1
PFAM: tail fiber repeat 2 protein; KEGG: ckr:CKR_2872 hypothetical protein.
   
   0.417
EHB62834.1
PFAM: coagulation factor 5/8 type domain protein; KEGG: phe:Phep_2687 hypothetical protein.
   
   0.417
Your Current Organism:
Paenibacillus lactis
NCBI taxonomy Id: 743719
Other names: P. lactis 154, Paenibacillus lactis 154, Paenibacillus lactis str. 154, Paenibacillus lactis strain 154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.